Transcript: LINC01114:6

Basic information

LNCipedia transcript ID: LINC01114:6 
LNCipedia gene ID: LINC01114
Location (hg38): chr2:104746638-104755165
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1229 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004360; NONHSAT072941
Alternative gene names: XLOC_002240; linc-MFSD9-14; PANCAT; LOC284998


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -237.7054 non-coding 
CPAT coding probability 4.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01114:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TGFBRAP1-6:5
3.1 lnc-TGFBRAP1-7:5
4.0 LINC01114:6
4.1 LINC01114:6
5.0 LINC01114:6
5.1 LINC01114:6
5.2 LINC01114:6