Transcript: LINC01117:4

Basic information

LNCipedia transcript ID: LINC01117:4 
LNCipedia gene ID: LINC01117
RefSeq ID: NR_110599
Location (hg38): chr2:176637754-176655958
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 656 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110599; NR_110599.1
Alternative gene names: ; LINC01117


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -141.4969 non-coding 
CPAT coding probability 12.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01117:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MTX2-1:8
4.0 LINC01117:4
4.1 LINC01117:4
5.0 LINC01117:4
5.1 LINC01117:4
5.2 LINC01117:4