Transcript: LINC01120:7

Basic information

LNCipedia transcript ID: LINC01120:7 
LNCipedia gene ID: LINC01120
RefSeq ID: NR_036499
Location (hg38): chr2:131402901-131408228
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3055 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_036499; NR_036499.1
Alternative gene names: ; LINC01120


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.1272 non-coding 
CPAT coding probability 17.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01120:7 no no no no

Available literature

  1. Durinck (2014), The Notch driven long non-coding RNA repertoire in T-cell acute lymphoblastic leukemia., Haematologica
  2. Idogawa (2014), Identification and analysis of large intergenic non-coding RNAs regulated by p53 family members through a genome-wide analysis of p53-binding sites., Hum. Mol. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PLEKHB2-1:8
4.0 LINC01120:7
4.1 LINC01120:7
5.0 LINC01120:7
5.1 LINC01120:7
5.2 LINC01120:7