Transcript: LINC01121:4

Basic information

LNCipedia transcript ID: LINC01121:4 
HGNC Gene Symbol: LINC01121    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1121
Ensembl Gene ID: ENSG00000205054
Ensembl Transcript ID: ENST00000378479
Location (hg38): chr2:45174344-45254941
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1095 bp
Exons: 6
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000378479; ENST00000378479.1; AC009236.1-001; OTTHUMT00000326236.1; ENST00000378479.5
Alternative gene names: ENSG00000205054; AC009236.1; ENSG00000205054.2; OTTHUMG00000152484.1; LINC01121; ENSG00000205054.6; UNQ6975


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -65.3912 non-coding 
CPAT coding probability 15.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01121:4 no no no no

Available literature

  1. Qian (2018), LINC01121 Inhibits Cell Apoptosis While Facilitating Proliferation, Migration, and Invasion Though Negative Regulation of the Camp/PKA Signaling Pathway via GLP1R., Cell. Physiol. Biochem.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SRBD1-3:4
3.1 lnc-SRBD1-4:3
4.0 LINC01121:4
4.1 LINC01121:4
5.0 LINC01121:4
5.1 LINC01121:4
5.2 LINC01121:4