Transcript: LINC01124:1

Basic information

LNCipedia transcript ID: LINC01124:1 
LNCipedia gene ID: LINC01124
Location (hg38): chr2:170723209-170770766
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2026 bp
Exons: 7
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000442456; ENST00000442456.1; AC007405.4-001; OTTHUMT00000333673.1; NONHSAT075417
Alternative gene names: ENSG00000234350; AC007405.4; ENSG00000234350.1; OTTHUMG00000154055.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.3545 non-coding 
CPAT coding probability 5.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01124:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC007405.2.1-1:1
3.1 lnc-AC007405.2.1-1:1
4.0 LINC01124:1
4.1 LINC01124:1
5.0 LINC01124:1
5.1 LINC01124:1
5.2 LINC01124:1