Transcript: LINC01124:19

Basic information

LNCipedia transcript ID: LINC01124:19 
LNCipedia gene ID: LINC01124
Location (hg38): chr2:170638369-170643944
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 511 bp
Exons: 4
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000423519; ENST00000423519.1; AC007277.3-002; OTTHUMT00000333675.1; NONHSAT147126
Alternative gene names: ENSG00000213981; AC007277.3; ENSG00000213981.3; OTTHUMG00000154056.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -177.2707 non-coding 
CPAT coding probability 9.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01124:19 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC007405.2.1-2:2
3.1 lnc-AC007405.2.1-2:2
4.0 lnc-AC007405.2.1-2:2
4.1 LINC01124:19
5.0 LINC01124:19
5.1 LINC01124:19
5.2 LINC01124:19