Transcript: LINC01127:34

Basic information

LNCipedia transcript ID: LINC01127:34 
HGNC Gene Symbol: LINC01127    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1127
Ensembl Gene ID: ENSG00000281162
Ensembl Transcript ID: ENST00000627337
Location (hg38): chr2:101983468-101984170
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 590 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000627337.1
Alternative gene names: ENSG00000281162.2; LINC01127; AC005035.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -58.2968 non-coding 
CPAT coding probability 12.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01127:34 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-IL1R2-2:5
4.1 lnc-IL1R2-2:5
5.0 lnc-IL1R2-2:5
5.1 LINC01127:15
5.2 LINC01127:34