Transcript: LINC01127:39

Basic information

LNCipedia transcript ID: LINC01127:39 
LNCipedia gene ID: LINC01127
Location (hg38): chr2:101987959-101989000
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 357 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00003800; NONHSAT072840
Alternative gene names: XLOC_001595; linc-IL1R2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -211.1499 non-coding 
CPAT coding probability 4.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01127:39 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IL1R2-1:2
3.1 lnc-IL1R2-1:2
4.0 lnc-IL1R2-1:2
4.1 lnc-IL1R2-2:19
5.0 lnc-IL1R2-2:19
5.1 LINC01127:20
5.2 LINC01127:39