Transcript: LINC01128:101

Basic information

LNCipedia transcript ID: LINC01128:101 
HGNC Gene Symbol: LINC01128    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1128
Ensembl Gene ID: ENSG00000228794
Ensembl Transcript ID: ENST00000425657
Location (hg38): chr1:851348-852752
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 845 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000425657; ENST00000425657.1; RP11-206L10.11-005; OTTHUMT00000007019.1; NONHSAT000184
Alternative gene names: ENSG00000228794; RP11-206L10.11; ENSG00000228794.2; OTTHUMG00000002468.3; ENSG00000228794.4; LINC01128; ENSG00000228794.8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -26.8026 non-coding 
CPAT coding probability 2.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01128:101 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AL669831.1-6:7
3.1 lnc-AL669831.1-5:8
4.0 lnc-AL669831.1-3:56
4.1 lnc-AL669831.1-3:56
5.0 lnc-AL669831.1-3:56
5.1 LINC01128:48
5.2 LINC01128:101