Transcript: LINC01128:55

Basic information

LNCipedia transcript ID: LINC01128:55 
HGNC Gene Symbol: LINC01128    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1128
Ensembl Gene ID: ENSG00000228794
Ensembl Transcript ID: ENST00000624927
Location (hg38): chr1:825138-849592
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 677 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000624927.3
Alternative gene names: ENSG00000228794.8; LINC01128


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -11.3786 non-coding 
CPAT coding probability 2.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01128:55 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AL669831.1-3:38
4.1 lnc-AL669831.1-3:38
5.0 lnc-AL669831.1-3:38
5.1 LINC01128:2
5.2 LINC01128:55