Transcript: LINC01128:74

Basic information

LNCipedia transcript ID: LINC01128:74 
HGNC Gene Symbol: LINC01128    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1128
Ensembl Gene ID: ENSG00000228794
Ensembl Transcript ID: ENST00000449005
Location (hg38): chr1:827673-853626
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 874 bp
Exons: 6
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000449005; ENST00000449005.1; RP11-206L10.11-004; OTTHUMT00000007018.1; ENST00000449005.5
Alternative gene names: ENSG00000228794; RP11-206L10.11; ENSG00000228794.2; OTTHUMG00000002468.3; ENSG00000228794.4; LINC01128; ENSG00000228794.8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 22.6247 non-coding 
CPAT coding probability 4.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01128:74 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AL669831.1-6:3
3.1 lnc-AL669831.1-5:4
4.0 lnc-AL669831.1-3:47
4.1 lnc-AL669831.1-3:47
5.0 lnc-AL669831.1-3:47
5.1 LINC01128:21
5.2 LINC01128:74