Transcript: LINC01135:7

Basic information

LNCipedia transcript ID: LINC01135:7 
HGNC Gene Symbol: LINC01135    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1135
Ensembl Gene ID: ENSG00000234807
Ensembl Transcript ID: ENST00000419531
Location (hg38): chr1:58785160-58899594
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 996 bp
Exons: 4
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000419531.2
Alternative gene names: ENSG00000234807.4; LINC01135; ENSG00000234807.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -174.2487 non-coding 
CPAT coding probability 16.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01135:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FGGY-5:7
4.0 LINC01135:7
4.1 LINC01135:7
5.0 LINC01135:7
5.1 LINC01135:7
5.2 LINC01135:7