Transcript: LINC01142:1

Basic information

LNCipedia transcript ID: LINC01142:1 
LNCipedia gene ID: LINC01142
Location (hg38): chr1:170271406-170284208
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1724 bp
Exons: 4
Sources: Broad Institute
Alternative transcript names: TCONS_00000023
Alternative gene names: XLOC_001087; linc-KIFAP3-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -35.5688 non-coding 
CPAT coding probability 24.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01142:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KIFAP3-1:1
3.1 lnc-KIFAP3-1:2
4.0 LINC01142:1
4.1 LINC01142:1
5.0 LINC01142:1
5.1 LINC01142:1
5.2 LINC01142:1