Transcript: LINC01142:5

Basic information

LNCipedia transcript ID: LINC01142:5 
LNCipedia gene ID: LINC01142
Location (hg38): chr1:170271592-170273823
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 681 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00002510
Alternative gene names: XLOC_001087; linc-KIFAP3-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -35.5688 non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01142:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KIFAP3-1:4
3.1 lnc-KIFAP3-1:4
4.0 LINC01142:5
4.1 LINC01142:5
5.0 LINC01142:5
5.1 LINC01142:5
5.2 LINC01142:5