Transcript: LINC01146:16

Basic information

LNCipedia transcript ID: LINC01146:16 
LNCipedia gene ID: LINC01146
Location (hg38): chr14:88036941-88044785
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 310 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022586; NONHSAT038184
Alternative gene names: XLOC_010897; linc-SPATA7-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -99.5387 non-coding 
CPAT coding probability 1.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01146:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GPR65-1:11
3.1 lnc-GPR65-1:11
4.0 LINC01146:16
4.1 LINC01146:16
5.0 LINC01146:16
5.1 LINC01146:16
5.2 LINC01146:16