Transcript: LINC01146:17

Basic information

LNCipedia transcript ID: LINC01146:17 
LNCipedia gene ID: LINC01146
Location (hg38): chr14:88037052-88045459
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 597 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022587; NONHSAT038185
Alternative gene names: XLOC_010897; linc-SPATA7-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -72.6498 non-coding 
CPAT coding probability 1.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01146:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GPR65-1:12
3.1 lnc-GPR65-1:12
4.0 LINC01146:17
4.1 LINC01146:17
5.0 LINC01146:17
5.1 LINC01146:17
5.2 LINC01146:17