Transcript: LINC01146:3

Basic information

LNCipedia transcript ID: LINC01146:3 
LNCipedia gene ID: LINC01146
Location (hg38): chr14:88024550-88087337
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 824 bp
Exons: 4
Sources: Broad Institute
Alternative transcript names: TCONS_00022351
Alternative gene names: XLOC_010897; linc-SPATA7-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -137.2677 non-coding 
CPAT coding probability 11.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01146:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GPR65-1:2
3.1 lnc-GPR65-1:2
4.0 LINC01146:3
4.1 LINC01146:3
5.0 LINC01146:3
5.1 LINC01146:3
5.2 LINC01146:3