Transcript: LINC01148:4

Basic information

LNCipedia transcript ID: LINC01148:4 
HGNC Gene Symbol: LINC01148    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1148
Ensembl Gene ID: ENSG00000258804
Ensembl Transcript ID: ENST00000557527
RefSeq ID: NR_038445
Location (hg38): chr14:86905778-86922755
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1763 bp
Exons: 5
Sources: Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_038445; ENST00000557527.1; NR_038445.1
Alternative gene names: ENSG00000258804.1; RP11-322L20.1; LINC01148; LOC283585


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.4533 non-coding 
CPAT coding probability 0.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01148:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-322L20.1.1-1:2
4.0 lnc-RP11-322L20.1.1-1:2
4.1 lnc-RP11-322L20.1.1-1:2
5.0 lnc-RP11-322L20.1.1-1:2
5.1 LINC01148:2
5.2 LINC01148:4