Transcript: LINC01150:2

Basic information

LNCipedia transcript ID: LINC01150:2 
HGNC Gene Symbol: LINC01150    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1150
Ensembl Gene ID: ENSG00000229671
Ensembl Transcript ID: ENST00000455671
Location (hg38): chr11:1902647-1907915
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 315 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00019134; ENST00000455671; ENST00000455671.1; AC051649.16-001; OTTHUMT00000315844.1; NONHSAT140008
Alternative gene names: XLOC_009023; linc-TNNT3; ENSG00000229671; AC051649.16; ENSG00000229671.1; OTTHUMG00000150032.1; LINC01150; 2G7; TCONS_00019134


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 24.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01150:2 no no no no

Available literature

  1. Yuan (1996), An extended region of biallelic gene expression and rodent-human synteny downstream of the imprinted H19 gene on chromosome 11p15.5., Hum. Mol. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LSP1-1:1
3.1 lnc-LSP1-1:1
4.0 LINC01150:2
4.1 LINC01150:2
5.0 LINC01150:2
5.1 LINC01150:2
5.2 LINC01150:2