Transcript: LINC01152:10

Basic information

LNCipedia transcript ID: LINC01152:10 
LNCipedia gene ID: LINC01152
Location (hg38): chr17:72030635-72037611
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 553 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000256124.1|ENCT00000177948.1
Alternative gene names: TCONS_00025128; CMPD


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -28.8068 non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01152:10 no no no no

Available literature

  1. Barter (2017), The long non-coding RNA <i>ROCR</i> contributes to SOX9 expression and chondrogenic differentiation of human mesenchymal stem cells., Development
  2. Ninomiya (1996), Isolation of a testis-specific cDNA on chromosome 17q from a region adjacent to the breakpoint of t(12;17) observed in a patient with acampomelic campomelic dysplasia and sex reversal., Hum. Mol. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01152:10
5.0 LINC01152:10
5.1 LINC01152:10
5.2 LINC01152:10