Transcript: LINC01152:2

Basic information

LNCipedia transcript ID: LINC01152:2 
LNCipedia gene ID: LINC01152
Location (hg38): chr17:72030640-72037121
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 289 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1641:1
Alternative gene names: TCONS_00025128; CMPD


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01152:2 no no no no

Available literature

  1. Barter (2017), The long non-coding RNA <i>ROCR</i> contributes to SOX9 expression and chondrogenic differentiation of human mesenchymal stem cells., Development
  2. Ninomiya (1996), Isolation of a testis-specific cDNA on chromosome 17q from a region adjacent to the breakpoint of t(12;17) observed in a patient with acampomelic campomelic dysplasia and sex reversal., Hum. Mol. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC01152:2
4.1 LINC01152:2
5.0 LINC01152:2
5.1 LINC01152:2
5.2 LINC01152:2