Transcript: LINC01159:12

Basic information

LNCipedia transcript ID: LINC01159:12 
LNCipedia gene ID: LINC01159
Location (hg38): chr2:104867685-104872598
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2344 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000229743.2|HBMT00000812525.1
Alternative gene names: linc-Brn1b


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -34.6085 non-coding 
CPAT coding probability 0.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01159:12 no no no no

Available literature

  1. Sauvageau (2013), Multiple knockout mouse models reveal lincRNAs are required for life and brain development., Elife


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01159:12
5.0 LINC01159:12
5.1 LINC01159:12
5.2 LINC01159:12