Transcript: LINC01159:2

Basic information

LNCipedia transcript ID: LINC01159:2 
LNCipedia gene ID: LINC01159
Location (hg38): chr2:104869248-104872727
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1185 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT072965
Alternative gene names: linc-Brn1b


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -129.7409 non-coding 
CPAT coding probability 39.66% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01159:2 no no no no

Available literature

  1. Sauvageau (2013), Multiple knockout mouse models reveal lincRNAs are required for life and brain development., Elife


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TGFBRAP1-5:5
4.0 LINC01159:2
4.1 LINC01159:2
5.0 LINC01159:2
5.1 LINC01159:2
5.2 LINC01159:2