Transcript: LINC01159:4

Basic information

LNCipedia transcript ID: LINC01159:4 
LNCipedia gene ID: LINC01159
RefSeq ID: NR_110373
Location (hg38): chr2:104865497-104872595
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3246 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110373; NR_110373.1
Alternative gene names: linc-Brn1b; LINC01159


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -34.6085 non-coding 
CPAT coding probability 7.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01159:4 no no no no

Available literature

  1. Sauvageau (2013), Multiple knockout mouse models reveal lincRNAs are required for life and brain development., Elife


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TGFBRAP1-5:7
4.0 LINC01159:4
4.1 LINC01159:4
5.0 LINC01159:4
5.1 LINC01159:4
5.2 LINC01159:4