Transcript: LINC01159:5

Basic information

LNCipedia transcript ID: LINC01159:5 
LNCipedia gene ID: LINC01159
Location (hg38): chr2:104869226-104872595
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1075 bp
Exons: 2
Sources: Refseq - Dec 2014
Alternative transcript names: NR_110374
Alternative gene names: linc-Brn1b


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -129.7409 non-coding 
CPAT coding probability 1.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01159:5 no no no no

Available literature

  1. Sauvageau (2013), Multiple knockout mouse models reveal lincRNAs are required for life and brain development., Elife


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TGFBRAP1-5:6
4.0 LINC01159:5
4.1 LINC01159:5
5.0 LINC01159:5
5.1 LINC01159:5
5.2 LINC01159:5