Transcript: LINC01160:4

Basic information

LNCipedia transcript ID: LINC01160:4 
LNCipedia gene ID: LINC01160
RefSeq ID: NR_034126
Location (hg38): chr1:111599007-111608318
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1542 bp
Exons: 5
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT005194; NR_034126; NR_034126.1
Alternative gene names: ; LINC01160


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 76.408 coding 
CPAT coding probability 22.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01160:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ADORA3-1:4
4.0 LINC01160:4
4.1 LINC01160:4
5.0 LINC01160:4
5.1 LINC01160:4
5.2 LINC01160:4