Transcript: LINC01165:1

Basic information

LNCipedia transcript ID: LINC01165:1 
HGNC Gene Symbol: LINC01165    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1165
Ensembl Gene ID: ENSG00000229081
Ensembl Transcript ID: ENST00000445190
Location (hg38): chr10:132520827-132522449
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1623 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000445190.1; RP11-432J24.6-001; OTTHUMT00000051081.1; NONHSAT017078
Alternative gene names: ENSG00000229081.1; RP11-432J24.6; OTTHUMG00000019291.1; LINC01165;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 57.45 non-coding 
CPAT coding probability 99.93% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01165:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-STK32C-4:1
4.0 LINC01165:1
4.1 LINC01165:1
5.0 LINC01165:1
5.1 LINC01165:1
5.2 LINC01165:1