Transcript: LINC01166:2

Basic information

LNCipedia transcript ID: LINC01166:2 
LNCipedia gene ID: LINC01166
Location (hg38): chr10:132943967-132965424
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2619 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018074; NONHSAT017095
Alternative gene names: XLOC_009005; linc-C10orf93-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.8215 non-coding 
CPAT coding probability 7.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01166:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TTC40-2:1
3.1 lnc-TTC40-2:1
4.0 LINC01166:2
4.1 LINC01166:2
5.0 LINC01166:2
5.1 LINC01166:2
5.2 LINC01166:2