Transcript: LINC01185:3

Basic information

LNCipedia transcript ID: LINC01185:3 
HGNC Gene Symbol: LINC01185    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1185
Ensembl Gene ID: ENSG00000228414
Ensembl Transcript ID: ENST00000439412
Location (hg38): chr2:60825132-60881314
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 554 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000439412; ENST00000439412.1; AC010733.4-002; OTTHUMT00000325763.1; NONHSAT070908; ENST00000439412.5
Alternative gene names: ENSG00000228414; AC010733.4; ENSG00000228414.2; OTTHUMG00000152126.3; ENSG00000228414.6; LINC01185; FLJ16341


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -189.576 non-coding 
CPAT coding probability 0.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01185:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PUS10-1:2
3.1 lnc-PUS10-1:1
4.0 LINC01185:3
4.1 LINC01185:3
5.0 LINC01185:3
5.1 LINC01185:3
5.2 LINC01185:3