Transcript: LINC01187:7

Basic information

LNCipedia transcript ID: LINC01187:7 
LNCipedia gene ID: LINC01187
Location (hg38): chr5:170193917-170199130
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1016 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT105037
Alternative gene names: KIDR


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -78.4248 non-coding 
CPAT coding probability 3.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01187:7 no no no no

Available literature

  1. Blondeau (2015), Identification of novel long non-coding RNAs in clear cell renal cell carcinoma., Clin Epigenetics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LCP2-2:9
4.0 LINC01187:7
4.1 LINC01187:7
5.0 LINC01187:7
5.1 LINC01187:7
5.2 LINC01187:7