Transcript: LINC01191:6

Basic information

LNCipedia transcript ID: LINC01191:6 
LNCipedia gene ID: LINC01191
RefSeq ID: NR_034128
Location (hg38): chr2:113979569-114007310
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 852 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_034128; NR_034128.1
Alternative gene names: VIN; lnc-ACTR3; LINC01191


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -175.9004 non-coding 
CPAT coding probability 7.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01191:6 no no no no

Available literature

  1. Winterling (2014), Evidence for a crucial role of a host non-coding RNA in influenza A virus replication., RNA Biol


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ACTR3-1:7
4.0 LINC01191:6
4.1 LINC01191:6
5.0 LINC01191:6
5.1 LINC01191:6
5.2 LINC01191:6