Transcript: LINC01194:10

Basic information

LNCipedia transcript ID: LINC01194:10 
LNCipedia gene ID: LINC01194
Location (hg38): chr5:12574836-12759648
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 691 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000248131.1|ENST00000513051.1
Alternative gene names: TAG


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -29.4644 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01194:10 no no no no

Available literature

  1. Hogan (2004), Identification of novel and widely expressed cancer/testis gene isoforms that elicit spontaneous cytotoxic T-lymphocyte reactivity to melanoma., Cancer Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01194:10
5.0 LINC01194:10
5.1 LINC01194:10
5.2 LINC01194:10