Transcript: LINC01194:5

Basic information

LNCipedia transcript ID: LINC01194:5 
LNCipedia gene ID: LINC01194
RefSeq ID: NR_033383
Location (hg38): chr5:12574857-12805183
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 624 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT100514; NR_033383; NR_033383.1
Alternative gene names: TAG; LINC01194


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -19.4977 non-coding 
CPAT coding probability 1.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01194:5 no no no no

Available literature

  1. Hogan (2004), Identification of novel and widely expressed cancer/testis gene isoforms that elicit spontaneous cytotoxic T-lymphocyte reactivity to melanoma., Cancer Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRIO-4:5
4.0 LINC01194:5
4.1 LINC01194:5
5.0 LINC01194:5
5.1 LINC01194:5
5.2 LINC01194:5