Transcript: LINC01198:12

Basic information

LNCipedia transcript ID: LINC01198:12 
LNCipedia gene ID: LINC01198
Location (hg38): chr13:46455287-46461207
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 562 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT033647
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 51.288 non-coding 
CPAT coding probability 37.15% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01198:12 no no no no

Available literature

  1. Wang (2016), LncRNA profile study reveals four-lncRNA signature associated with the prognosis of patients with anaplastic gliomas., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KIAA0226L-1:12
4.0 LINC01198:12
4.1 LINC01198:12
5.0 LINC01198:12
5.1 LINC01198:12
5.2 LINC01198:12