Transcript: LINC01198:14

Basic information

LNCipedia transcript ID: LINC01198:14 
LNCipedia gene ID: LINC01198
Location (hg38): chr13:46455353-46458238
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 562 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000458282; ENST00000458282.1; RP11-189B4.6-001; OTTHUMT00000044822.1; NONHSAT033650
Alternative gene names: ENSG00000231817; RP11-189B4.6; ENSG00000231817.1; OTTHUMG00000016875.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.0465 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01198:14 no no no no

Available literature

  1. Wang (2016), LncRNA profile study reveals four-lncRNA signature associated with the prognosis of patients with anaplastic gliomas., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KIAA0226L-1:1
3.1 lnc-KIAA0226L-1:1
4.0 LINC01198:14
4.1 LINC01198:14
5.0 LINC01198:14
5.1 LINC01198:14
5.2 LINC01198:14