Transcript: LINC01198:16

Basic information

LNCipedia transcript ID: LINC01198:16 
LNCipedia gene ID: LINC01198
RefSeq ID: NR_120426
Location (hg38): chr13:46455203-46466776
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 935 bp
Exons: 6
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120426.1
Alternative gene names: LINC01198


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 51.288 non-coding 
CPAT coding probability 18.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01198:16 no no no no

Available literature

  1. Wang (2016), LncRNA profile study reveals four-lncRNA signature associated with the prognosis of patients with anaplastic gliomas., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC01198:16
5.1 LINC01198:16
5.2 LINC01198:16