Transcript: LINC01203:5

Basic information

LNCipedia transcript ID: LINC01203:5 
HGNC Gene Symbol: LINC01203    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1203
Ensembl Gene ID: ENSG00000226985
Ensembl Transcript ID: ENST00000456091
Location (hg38): chrX:13336381-13373634
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 476 bp
Exons: 4
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00016966; ENST00000456091; ENST00000456091.1; RP11-142G7.2-002; OTTHUMT00000055791.1; NONHSAT136303
Alternative gene names: XLOC_007930; linc-EGFL6-1; ENSG00000226985; RP11-142G7.2; ENSG00000226985.1; OTTHUMG00000021151.1; ENSG00000226985.5; LINC01203;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -74.3433 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01203:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-EGFL6-2:3
3.1 lnc-EGFL6-2:3
4.0 LINC01203:5
4.1 LINC01203:5
5.0 LINC01203:5
5.1 LINC01203:5
5.2 LINC01203:5