Transcript: LINC01204:5

Basic information

LNCipedia transcript ID: LINC01204:5 
LNCipedia gene ID: LINC01204
Location (hg38): chrX:45561611-45602547
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 334 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00017158; NONHSAT136797
Alternative gene names: XLOC_007966; linc-ZNF673-4;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -323.1438 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01204:5 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KDM6A-1:4
3.1 lnc-KDM6A-2:4
4.0 LINC01204:5
4.1 LINC01204:5
5.0 LINC01204:5
5.1 LINC01204:5
5.2 LINC01204:5