Transcript: LINC01206:45

Basic information

LNCipedia transcript ID: LINC01206:45 
LNCipedia gene ID: LINC01206
Location (hg38): chr3:182004389-182010678
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6290 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT093540
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
EGRKWVEFMALDMK 92.3076923076923% sense-2
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.7817 non-coding 
CPAT coding probability 11.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01206:45 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SOX2-2:21
4.0 LINC01206:45
4.1 LINC01206:45
5.0 LINC01206:45
5.1 LINC01206:45
5.2 LINC01206:45