Transcript: LINC01206:6

Basic information

LNCipedia transcript ID: LINC01206:6 
HGNC Gene Symbol: LINC01206    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1206
Ensembl Gene ID: ENSG00000242512
Ensembl Transcript ID: ENST00000467313
Location (hg38): chr3:181952374-181973345
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 703 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000467313; ENST00000467313.1; RP11-416O18.1-004; OTTHUMT00000350468.1; NONHSAT093523; ENST00000467313.5
Alternative gene names: ENSG00000242512; RP11-416O18.1; ENSG00000242512.2; OTTHUMG00000158238.2; ENSG00000242512.4; ENSG00000242512.8; LINC01206;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -211.9762 non-coding 
CPAT coding probability 7.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01206:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SOX2-2:2
3.1 lnc-SOX2-2:2
4.0 LINC01206:6
4.1 LINC01206:6
5.0 LINC01206:6
5.1 LINC01206:6
5.2 LINC01206:6