Transcript: LINC01215:1

Basic information

LNCipedia transcript ID: LINC01215:1 
LNCipedia gene ID: LINC01215
Location (hg38): chr3:108109752-108138952
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3584 bp
Exons: 9
Sources: NONCODE v4
Alternative transcript names: NONHSAT091078
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.1698 non-coding 
CPAT coding probability 7.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01215:1 no no no no

Available literature

  1. Li (2015), Construction and analysis of lncRNA-lncRNA synergistic networks to reveal clinically relevant lncRNAs in cancer., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HHLA2-1:2
4.0 LINC01215:1
4.1 LINC01215:1
5.0 LINC01215:1
5.1 LINC01215:1
5.2 LINC01215:1