Transcript: LINC01220:6

Basic information

LNCipedia transcript ID: LINC01220:6 
LNCipedia gene ID: LINC01220
Location (hg38): chr14:75294573-75296651
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 697 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022556; NONHSAT037855
Alternative gene names: XLOC_010877; linc-JDP2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -111.1857 non-coding 
CPAT coding probability 9.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01220:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FOS-1:2
3.1 lnc-FOS-2:4
4.0 LINC01220:6
4.1 LINC01220:6
5.0 LINC01220:6
5.1 LINC01220:6
5.2 LINC01220:6