Transcript: LINC01224:11

Basic information

LNCipedia transcript ID: LINC01224:11 
HGNC Gene Symbol: LINC01224    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1224
Ensembl Gene ID: ENSG00000269416
Ensembl Transcript ID: ENST00000593573
Location (hg38): chr19:23400984-23416059
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 798 bp
Exons: 6
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT063909; ENST00000593573.1; ENST00000593573.5
Alternative gene names: ENSG00000269416.1; CTB-175P5.4; ENSG00000269416.5; LINC01224;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.2014 non-coding 
CPAT coding probability 0.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01224:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF91-1:10
4.0 LINC01224:11
4.1 LINC01224:11
5.0 LINC01224:11
5.1 LINC01224:11
5.2 LINC01224:11