Transcript: LINC01224:3

Basic information

LNCipedia transcript ID: LINC01224:3 
HGNC Gene Symbol: LINC01224    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1224
Ensembl Gene ID: ENSG00000269416
Ensembl Transcript ID: ENST00000602077
Location (hg38): chr19:23402362-23416074
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 610 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT063912; ENST00000602077.1; ENST00000602077.5
Alternative gene names: ENSG00000269416.1; CTB-175P5.4; ENSG00000269416.5; LINC01224;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.796 non-coding 
CPAT coding probability 1.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01224:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF91-1:6
4.0 LINC01224:3
4.1 LINC01224:3
5.0 LINC01224:3
5.1 LINC01224:3
5.2 LINC01224:3