Transcript: LINC01224:42

Basic information

LNCipedia transcript ID: LINC01224:42 
LNCipedia gene ID: LINC01224
Ensembl Gene ID: ENSG00000284428
Ensembl Transcript ID: ENST00000640517
Location (hg38): chr19:23260731-23274232
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 561 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT063874; ENST00000598323.1; ENST00000598323.5; ENST00000640517.1
Alternative gene names: ENSG00000213971.3; RP11-15H20.6; ENSG00000213971.7; ; ENSG00000284428.1; AC092329.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.6628 non-coding 
CPAT coding probability 0.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01224:42 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC092329.1-1:16
4.0 lnc-AC092329.1-1:16
4.1 LINC01224:42
5.0 LINC01224:42
5.1 LINC01224:42
5.2 LINC01224:42