Transcript: LINC01224:56

Basic information

LNCipedia transcript ID: LINC01224:56 
LNCipedia gene ID: LINC01224
Ensembl Gene ID: ENSG00000284428
Ensembl Transcript ID: ENST00000638174
Location (hg38): chr19:23259961-23262634
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1989 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000397094.1; ENST00000638174.1
Alternative gene names: ENSG00000213971.3; RP11-15H20.6; ENSG00000213971.7; ; ENSG00000284428.1; AC092329.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.5048 non-coding 
CPAT coding probability 36.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01224:56 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC092329.1-1:23
4.0 lnc-AC092329.1-1:23
4.1 LINC01224:56
5.0 LINC01224:56
5.1 LINC01224:56
5.2 LINC01224:56