Transcript: LINC01226:4

Basic information

LNCipedia transcript ID: LINC01226:4 
LNCipedia gene ID: LINC01226
Location (hg38): chr1:31506281-31521122
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 303 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228682.2|FTMT20300074745.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -4.9106 non-coding 
CPAT coding probability 9.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01226:4 no no no no

Available literature

  1. Fang (2014), A distinct set of long non-coding RNAs in childhood MLL-rearranged acute lymphoblastic leukemia: biology and epigenetic target., Hum. Mol. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01226:4
5.0 LINC01226:4
5.1 LINC01226:4
5.2 LINC01226:4