Transcript: LINC01226:6

Basic information

LNCipedia transcript ID: LINC01226:6 
LNCipedia gene ID: LINC01226
Location (hg38): chr1:31506281-31508886
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1634 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228682.2|FTMT20300061166.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -32.968 non-coding 
CPAT coding probability 48.80% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01226:6 no no no no

Available literature

  1. Fang (2014), A distinct set of long non-coding RNAs in childhood MLL-rearranged acute lymphoblastic leukemia: biology and epigenetic target., Hum. Mol. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01226:6
5.0 LINC01226:6
5.1 LINC01226:6
5.2 LINC01226:6