Transcript: LINC01226:8

Basic information

LNCipedia transcript ID: LINC01226:8 
LNCipedia gene ID: LINC01226
Location (hg38): chr1:31506281-31539618
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 14676 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228682.2|MICT00000007028.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.4791 non-coding 
CPAT coding probability 41.18% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01226:8 no no no no

Available literature

  1. Fang (2014), A distinct set of long non-coding RNAs in childhood MLL-rearranged acute lymphoblastic leukemia: biology and epigenetic target., Hum. Mol. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01226:8
5.0 LINC01226:8
5.1 LINC01226:8
5.2 LINC01226:8