Transcript: LINC01227:13

Basic information

LNCipedia transcript ID: LINC01227:13 
LNCipedia gene ID: LINC01227
Location (hg38): chr16:80547988-80569687
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 826 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260183.1|FTMT26100042505.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -121.023 non-coding 
CPAT coding probability 1.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01227:13 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01227:13
5.0 LINC01227:13
5.1 LINC01227:13
5.2 LINC01227:13